gosling.js
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Enable hiding chromosomes of no interest for the compactness
In the following example of structural variants, ideally, we can remove chromosomes that do not contain any events (e.g., chr1
).

We could support this by using custom assembly specification:
assembly: [
- ["chr1", 249250621],
["chr2", 243199373],
["chr3", 198022430],
["chr4", 191154276],
["chr5", 180915260],
["chr6", 171115067],
["chr7", 159138663],
["chr8", 146364022],
["chr9", 141213431],
["chr10", 135534747],
["chr11", 135006516],
["chr12", 133851895],
["chr13", 115169878],
["chr14", 107349540],
["chr15", 102531392],
["chr16", 90354753],
["chr17", 81195210],
["chr18", 78077248],
["chr19", 59128983],
["chr20", 63025520],
["chr21", 48129895],
["chr22", 51304566],
["chrX", 155270560],
["chrY", 59373566],
["chrM", 16571]
]
Relevant paper figure:
Reference: https://pubmed.ncbi.nlm.nih.gov/21215367/#&gid=article-figures&pid=figure-4-uid-4