Gosling.js APIs

[sehilyi]

APIs to Support

Navigation

• [x] Zoom to gene and genomic position

Publication

• [x] Exporting image files (PDF and PNG)

Customization of Visualization

• [x] Remove and add tracks and views w/o rerendering entirely
• [ ] Change visual encoding (e.g., change mark, change color scale, ...)
• [ ] Apply new data transformation w/o rerendering entirely

Interaction Events

• [ ] Capture click events and return information. We can first support capturing the genomic position. (Refer to higlass code)
• [ ] Return raw data table shown in the visualization

Requirements

• Maintain the current state of gosling visualizations (e.g., view position) when changing the appearance (e.g., remove a track) instead of rerendering entirely.

References

1. http://compbio.med.harvard.edu/chromothripsis/