dockerflow

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Issues with default value - parameter - over 1024 bytes ...

6

Hi @jbingham - "error": { "code": 400, "message": "Invalid value for field \"parameter.defaultValue\": too long: 1471 bytes, want no longer than 1024 bytes", "status": "INVALID_ARGUMENT" } Just so you know,...

vangalamaheshh

Shutting down master won't shutdown the running ggp instances

2

Hi @jbingham - Canceling the pipeline using "stop job" feature on Dataflow UI, terminates the master. However, if there are any instances running (vms with name ggp*), they are not...

vangalamaheshh

Eg, suppose there are 2 input parameters: sampleName: x, y, z inputFile: fileX, fileY, fileZ It would be nice to be able to scatter by [x, fileX], [y, fileY], [z,...

jbingham

Workflows can include steps that are defined in separate files. It would be nice if they could include entire workflows as steps, loaded from separate files. Note: this functionality used...

jbingham

Finding files created by executable

7

I am working with a software package that takes as a parameter the name of an output directory. Then, a bunch of files are written to that output directory. I...

seandavi

Support for CWL?

3

Is there any support being build or that exists to run a CWL-defined workflow using dockerflow?

seandavi

HttpUtils uses hand-coded URL strings with auth, rather than the Google Java Client for GCS, which is the preferred way to read files.

jbingham