ImportError: cannot import name 'notebook_utils' from 'alphafold.notebooks' (unknown location)

[taylao1]

I'm trying to run AlphaFold in the Colab interface for the first time and the first two code blocks ran fine, however, I get this import error when I try running the 3rd block of code with my amino acid sequence:

Not sure how to fix this since it seems to be a directory error and not a dependency error.

Thoughts on how to get to find the correct location?

Thanks! Tayla

[Htomlinson14]

Hi! Is there a chance that your kernel died after running cells 1 and 2? If so, and it restarted, this would mean that cells 1 and 2 would need to be re-run from the start. Could you try running the notebook again?

[taylao1]

I think that worked! Thanks!

[Omehrpour]

Import error: cannot import name 'get_pae_json' from 'alphafold.notebooks.notebook_utils' (/usr/local/lib/python3.10/site-packages/alphafold/notebooks/notebook_utils.py) any one can help?