alphafold
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ImageNotFound: 404 Client Error
Hello everyone,
I've been trying to set up Alphafold locally over the past week and have been running into a bunch of issues. Right now I got the docker image built, and when I try to run run_docker.py
I get this error:
`(alpha-env) minsu@minsu-MS-7B79:~/alphafold$ python3 docker/run_docker.py --fasta_paths=/home/minsu/Sequences/htt.fasta --max_template_date=2022-01-01 --data_dir=/home/minsu/DATABASES --output_dir=/home/minsu/output I0801 00:34:25.236747 140390681702400 run_docker.py:116] Mounting /home/minsu/Sequences -> /mnt/fasta_path_0 I0801 00:34:25.236881 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/uniref90 -> /mnt/uniref90_database_path I0801 00:34:25.236961 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/mgnify -> /mnt/mgnify_database_path I0801 00:34:25.237031 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES -> /mnt/data_dir I0801 00:34:25.237092 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/pdb_mmcif/mmcif_files -> /mnt/template_mmcif_dir I0801 00:34:25.237161 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/pdb_mmcif -> /mnt/obsolete_pdbs_path I0801 00:34:25.237237 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/pdb70 -> /mnt/pdb70_database_path I0801 00:34:25.237309 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/uniref30 -> /mnt/uniref30_database_path I0801 00:34:25.237380 140390681702400 run_docker.py:116] Mounting /home/minsu/DATABASES/bfd -> /mnt/bfd_database_path Traceback (most recent call last): File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/client.py", line 268, in _raise_for_status response.raise_for_status() File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/requests/models.py", line 1021, in raise_for_status raise HTTPError(http_error_msg, response=self) requests.exceptions.HTTPError: 404 Client Error: Not Found for url: http+docker://localhost/v1.43/containers/create
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/models/containers.py", line 811, in run container = self.create(image=image, command=command, File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/models/containers.py", line 870, in create resp = self.client.api.create_container(**create_kwargs) File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/container.py", line 430, in create_container return self.create_container_from_config(config, name) File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/container.py", line 441, in create_container_from_config return self._result(res, True) File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/client.py", line 274, in _result self._raise_for_status(response) File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/client.py", line 270, in _raise_for_status raise create_api_error_from_http_exception(e) File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/errors.py", line 31, in create_api_error_from_http_exception raise cls(e, response=response, explanation=explanation) docker.errors.ImageNotFound: 404 Client Error for http+docker://localhost/v1.43/containers/create: Not Found ("No such image: alphafold:latest")
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/docker/api/client.py", line 268, in _raise_for_status response.raise_for_status() File "/home/minsu/alphafold/alpha-env/lib/python3.10/site-packages/requests/models.py", line 1021, in raise_for_status raise HTTPError(http_error_msg, response=self) requests.exceptions.HTTPError: 404 Client Error: Not Found for url: http+docker://localhost/v1.43/images/create?tag=latest&fromImage=alphafold
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/minsu/alphafold/docker/run_docker.py", line 267, in
When I run docker images
, it shows that alphafold is there, so I'm not entirely sure how to fix it from here.
REPOSITORY TAG IMAGE ID CREATED SIZE
alphafold latest 7b33eab18f4b About an hour ago 10.3GB
hello-world latest 9c7a54a9a43c 2 months ago 13.3kB
Have you login in your docker account ?
I am having the same issue, docker login returns:
Authenticating with existing credentials... Login Succeeded
I get the same error when I try to pull from docker desktop as well, unlike my other images