alphafold
alphafold copied to clipboard
Code didn't update to v3
Hello,
I followed the instructions for updating the existing installation, but when I check config.py I still see v2 in the multimer MODEL_PRESETS and in scripts/download_alphafold_params.sh the SOURCE_URL is still set to that for v2.2 (2022-03-02). Should I just manually update these or are there other code updates that likely didn't update? Thanks for the advice.
Matt
To add, running git describe --tags --abbrev=0
outputs v2.2.4
I solved this and figured I would add how for the less computer savvy people like myself:
instead of git fetch origin main
I ran git pull origin main
as this actually updated the code. I think I had also previously made a small change to alphafold/data/tools/jackhmmer.py
because I was getting an initial error and someone said to change a line in there. Because I made this change, I had to first run git stash
and then everything worked fine. Hope this helps!