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Alphafold2 error

Open lmvl01 opened this issue 1 year ago • 2 comments

AttributeError: module 'collections' has no attribute 'Iterable' [at run Alphafold]

I got this error when I tried to use the Alphafold2 advanced in Google collab. Does anyone know how to fix it? Thanks! (This is my first time using Alphafold, so it could also be that I did something wrong, I followed the instructions according to proteopedia.)

lmvl01 avatar Jun 14 '23 15:06 lmvl01

Hi -- was this in colabfold or the colab in this repository?

On Wed, 14 Jun 2023 at 16:00, lmvl01 @.***> wrote:

AttributeError: module 'collections' has no attribute 'Iterable' [at run Alphafold]

I got this error when I tried to use the Alphafold2 advanced in Google collab. Does anyone know how to fix it? Thanks! (This is my first time using Alphafold, so it could also be that I did something wrong, I followed the instructions according to proteopedia.)

— Reply to this email directly, view it on GitHub https://github.com/deepmind/alphafold/issues/780, or unsubscribe https://github.com/notifications/unsubscribe-auth/ADKS2B7PADRSIZ4O4OUEXLLXLHG2LANCNFSM6AAAAAAZGQDVNA . You are receiving this because you are subscribed to this thread.Message ID: @.***>

Htomlinson14 avatar Jun 14 '23 15:06 Htomlinson14

Hi, thanks for your comment! And sorry, I think I don't know enough about all this to really understand the question, but this was in the colabfold of the shared Google thing. I just discovered that it's possible to see the code in this repository, so I will try that and see if it works!

lmvl01 avatar Jun 15 '23 08:06 lmvl01