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tensorflow ERROR while NVIDIA Container Toolkit is working properly

Open genomicsgroup opened this issue 2 years ago • 0 comments

I0407 10:26:52.695398 139753170155328 run_docker.py:113] Mounting /data/ppi/A100 -> /mnt/fasta_path_0 I0407 10:26:52.695593 139753170155328 run_docker.py:113] Mounting /data/alphafold/uniref90 -> /mnt/uniref90_database_path I0407 10:26:52.695678 139753170155328 run_docker.py:113] Mounting /data/alphafold/mgnify -> /mnt/mgnify_database_path I0407 10:26:52.695742 139753170155328 run_docker.py:113] Mounting /data/alphafold -> /mnt/data_dir I0407 10:26:52.695805 139753170155328 run_docker.py:113] Mounting /data/alphafold/pdb_mmcif/mmcif_files -> /mnt/template_mmcif_dir I0407 10:26:52.695875 139753170155328 run_docker.py:113] Mounting /data/alphafold/pdb_mmcif -> /mnt/obsolete_pdbs_path I0407 10:26:52.695946 139753170155328 run_docker.py:113] Mounting /data/alphafold/uniprot -> /mnt/uniprot_database_path I0407 10:26:52.696016 139753170155328 run_docker.py:113] Mounting /data/alphafold/pdb_seqres -> /mnt/pdb_seqres_database_path I0407 10:26:52.696091 139753170155328 run_docker.py:113] Mounting /data/alphafold/uniclust30/uniclust30_2018_08 -> /mnt/uniclust30_database_path I0407 10:26:52.696166 139753170155328 run_docker.py:113] Mounting /data/alphafold/bfd -> /mnt/bfd_database_path I0407 10:26:55.747741 139753170155328 run_docker.py:255] I0407 02:26:55.746643 140317005801280 templates.py:857] Using precomputed obsolete pdbs /mnt/obsolete_pdbs_path/obsolete.dat. I0407 10:26:56.017539 139753170155328 run_docker.py:255] I0407 02:26:56.016888 140317005801280 tpu_client.py:54] Starting the local TPU driver. I0407 10:26:56.017780 139753170155328 run_docker.py:255] I0407 02:26:56.017272 140317005801280 xla_bridge.py:212] Unable to initialize backend 'tpu_driver': Not found: Unable to find driver in registry given worker: local:// I0407 10:26:56.018094 139753170155328 run_docker.py:255] 2022-04-07 02:26:56.017712: W external/org_tensorflow/tensorflow/stream_executor/platform/default/dso_loader.cc:64] Could not load dynamic library 'libcuda.so.1'; dlerror: libcuda.so.1: cannot open shared object file: No such file or directory; LD_LIBRARY_PATH: /usr/local/nvidia/lib:/usr/local/nvidia/lib64 I0407 10:26:56.018174 139753170155328 run_docker.py:255] 2022-04-07 02:26:56.017761: W external/org_tensorflow/tensorflow/stream_executor/cuda/cuda_driver.cc:269] failed call to cuInit: UNKNOWN ERROR (303) I0407 10:26:56.018241 139753170155328 run_docker.py:255] I0407 02:26:56.017858 140317005801280 xla_bridge.py:212] Unable to initialize backend 'gpu': Failed precondition: No visible GPU devices. I0407 10:26:56.018314 139753170155328 run_docker.py:255] I0407 02:26:56.017982 140317005801280 xla_bridge.py:212] Unable to initialize backend 'tpu': Invalid argument: TpuPlatform is not available. I0407 10:26:56.018646 139753170155328 run_docker.py:255] W0407 02:26:56.018047 140317005801280 xla_bridge.py:215] No GPU/TPU found, falling back to CPU. (Set TF_CPP_MIN_LOG_LEVEL=0 and rerun for more info.)

genomicsgroup avatar Apr 07 '22 02:04 genomicsgroup