hoomd-examples
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glotzerlab
HOOMD-blue example scripts.
## File name 02-Simulating-a-System-of-Patchy-Particles.ipynb ## Description Running this notebook, both within jupyter and as a python script, results in the following error ``` (base) Patron@Patrons-MacBook-Air ~ % python 02-Simulating-a-System-of-Patchy-Particles.py /Users/Patron/02-Simulating-a-System-of-Patchy-Particles.py:237:...
## Tutorial description Teach users how to run active matter simulations in HOOMD. * 2D active particles * `force.Active` * `methods.OverdampedViscous` * Rotational diffusion. * Quiver plot of particle velocities....
## Tutorial description Teach users how to run simulations of bead spring polymers. * Initialization (bonds, angles). * Compression. * Exclusions. * Pair and bond forces. ## Author Contributions welcome....