pystackreg
pystackreg copied to clipboard
glichtner
A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
Hi, thanks for creating this very useful tool! I want to apply pystackreg to register two microscopy images. The reference image has a high and the second image has a...
Hi I have almost 17000 frames to be aligned. I am wondering if pystackreg can registersuch images (using first frame as reference, let's say) in parallel ? Thanks
Hi, pystackreg is great as I am trying to get into image processing with Python instead of ImageJ/Fiji. Unfortunately I am running into some issues regarding the memory usage with...
Use pool to parallelize stack registration, added a variable `processes` that sets the number of processes to use. If it is 1 the original code is executed if it is...
ASAIK using `from tqdm.auto import tqdm` results with better jupyter notebook support. @casperdcl ?
Here is the issue encountered when running pystackreg after the install with numpy.2.x. Could you please look into it and provide a fix? Thank you 
Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 3 to 4.1.7. Release notes Sourced from actions/download-artifact's releases. v4.1.7 What's Changed Update @actions/artifact dependency by @bethanyj28 in actions/download-artifact#325 Full Changelog: https://github.com/actions/download-artifact/compare/v4.1.6...v4.1.7 v4.1.6 What's Changed updating @actions/artifact...
![dependabot[bot] avatar](https://avatars.githubusercontent.com/in/29110?v=4 "dependabot[bot] avatar"){kind=avatar}
Hi thanks for the great repo. is the code be compatible for using CUDA to paralleize registration of multiple image pairs. thanks
Hi, I'm trying to use the transformation matrices produced by pystackreg to do registration on individual coordinates (x,y). I can't seem to make the outputs line up using matrix multiplication...
