Can sixtyfour pull data from public S3 buckets?

[sckott]

via Emma in slack

Standard genomics: GATK Test Data

• Publicly hosted on AWS S3. To access, use aws cli and the --no-sign-request flag after your commands.
• Webpage: https://s3.amazonaws.com/gatk-test-data/gatk-test-data-readme.html
• Example usage:

# Look at 'folder' contents
aws s3 ls --no-sign-request s3://gatk-test-data/wgs_bam/NA12878_20k_hg38/

# Copy NA12878.bam to current location
aws s3 cp --no-sign-request s3://gatk-test-data/wgs_bam/NA12878_20k_hg38/NA12878.bam .

Single-cell: 10X Datasets

• To access, fill out their little form about yourself and then you can download
• Webpage: https://www.10xgenomics.com/datasets