retina-features

retina-features copied to clipboard

Error: not enough values to unpack (expected 3, got 2)

1

Hello, i'm getting the error below when running bloodvessel.py, any solution behind this? ` Traceback (most recent call last): File "bloodvessels.py", line 62, in bloodvessel = extract_bv(fundus) File "bloodvessels.py", line...

YrgkenKoutsi

davitshahnazaryan

from fundus to fundus_eroded

chiukapoor

please help me for retina optic disc segmentation code

4

moorthysmart

Code Linting / PEP8 cleanup / CI with Travis CI

2

Hello, a PEP8 cleanup could be a nice improvement. flake8 can help. You can check PEP8 with Continuous Integration (Travis CI for example) See for example https://github.com/scls19fr/windrose/blob/master/.travis.yml https://medium.com/python-pandemonium/what-is-flake8-and-why-we-should-use-it-b89bd78073f2 Kind regards

s-celles

CLI parameters with Click

1

Hello, Instead of changing the `pathFolder` and `destinationFolder` variable in the file `bloodvessels.py` to point to the directory where your images are located (which can lead to inappropriate Git commits...

s-celles

Avoid '/' for path concatenation

1

https://github.com/getsanjeev/retina-features/blob/753a26d75c97dfa8a46f3d9242e61e94851d0c29/microaneurysm.py#L139 [os.path.join](https://docs.python.org/3/library/os.path.html#os.path.join) is OS independent

s-celles

Avoid /home/sherlock

1

https://github.com/getsanjeev/retina-features/blob/753a26d75c97dfa8a46f3d9242e61e94851d0c29/bloodvessels.py#L54 [os.path.expanduser](https://docs.python.org/3/library/os.path.html#os.path.expanduser) can help to avoid "/home/sherlock" in this script (which limit script usage on a Linux OS with a user named sherlock)

s-celles

bloodvessels.py ` ret,f6 = cv2.threshold(f5,15,255,cv2.THRESH_BINARY)` It may be necessary to apply a dynamic search for the binarization threshold, the result strongly depends on the illumination. For example Otsu's method.

AndreiDz

Traceback (most recent call last): File "microaneurysm.py", line 1, in from SimpleCV import Image, Color File "/home/chuench/.local/lib/python2.7/site-packages/SimpleCV/__init__.py", line 3, in from SimpleCV.base import * File "/home/chuench/.local/lib/python2.7/site-packages/SimpleCV/base.py", line 59, in raise...

chuench