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Issues with Conda installation

Open AshSudarshan opened this issue 2 years ago • 4 comments

Hi! Thanks for developing this tool. I am unable to install this via Conda since it says that the package isn't available there. Any instructions to download the tool through Conda would be helpful.

AshSudarshan avatar Nov 02 '23 03:11 AshSudarshan

https://github.com/geronimp/enrichM#conda-recommended

conda create -c bioconda -n enrichm_env enrichm=0.6.5 (?)

MaryoHg avatar Nov 05 '23 01:11 MaryoHg

https://github.com/geronimp/enrichM#conda-recommended

conda create -c bioconda -n enrichm_env enrichm=0.6.5 (?)

I did try that but the conda installation stalled saying it couldn't locate the enrichment package:

Screen Shot 2023-11-04 at 10 16 59 PM

AshSudarshan avatar Nov 05 '23 02:11 AshSudarshan

I'm actually working on a recent environment. Try installing from this yml-file file:

$ conda env create -n enrichm_env --file enrichm.yml

Good luck!

MaryoHg avatar Nov 06 '23 01:11 MaryoHg

Thanks! This solution worked well!!

But, I am getting an error with enrichm data --create:

if version_local!=version_remote: UnboundLocalError: local variable 'version_local' referenced before assignment

It is similar to the issue reported by another user of enrichm and seems to be unsolved at this point.

AshSudarshan avatar Nov 06 '23 21:11 AshSudarshan