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Add Yleaf to PyPI/bioconda

Open TCLamnidis opened this issue 1 year ago • 1 comments

Are there plans to add Yleaf to PyPI and/or bioconda? (I did not find it on either. Sorry if it is already there.)

The existing conda environment file is already great for standalone running, but including Yleaf into PyPI (and from there bioconda) would get you a docker/singularity container for each release without any extra effort, via biocontainers. That in turn would make it possible to include Yleaf in reproducible workflows and pipelines.

TCLamnidis avatar Feb 22 '24 10:02 TCLamnidis

Thanks for your suggestion! I will look into containarization. But please also feel free to create a pull request if you have created a docker file yourself. We would be happy to host community provided docker images.

dionzand avatar Mar 04 '24 09:03 dionzand