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Published 20 hours ago • verified publisher icon geneontology

Implement GPAD/GPI cross check so that bad identifiers are eliminated early and do not make it to output

Open kltm opened this issue 10 months ago • 12 comments

When a GPAD and its associated GPI are parsed, a check should occur (GORULE:0000001) and if a matching identifier is not found the annotation is eliminated. Currently, when a GAF is emitted and there is not a matching identifier from the GPI file in the GPAD, it is passed through but with taxon:0.

Under no circumstances should taxon:0 be emitted by the ontobio code.

kltm avatar Sep 12 '23 20:09 kltm