go-ontology
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geneontology
Source ontology files for the Gene Ontology
Hi three issues here 1. SMAD signaling GO terms ( GO:0060389 pathway-restricted SMAD protein phosphorylation and GO:0060395 SMAD protein signal transduction) are part of TGFB signaling pathway, however I assume...
So, Val and I think some terms need to be obsoleted in the ontology. We started talking about it when I requested a long precomposed BP to describe fep1. Fep1...
* **GO term ID and Label** GO:0097573 glutathione oxidoreductase activity Def: Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione. PMID:18992757 * **Reason for deprecation** I'm not sure...
Hello, Protégé cannot count items in a logical definitions, such that terms like GO:0062158 chloride:proton antiporter activity, which transports a positively charged and a negatively charged ions, ends up under...
GO:0002142 stereocilia ankle link complex * **Which term do you propose this term merge into? Provide GO ID and term label** GO:1990696 USH2 complex * **Reason for merge** They are...
Right now there is a lot of unnecessary output, and it makes it hard to find errors when there is a failure.
Although this might seem counterintuitive, I am not sure that "cohesin unloading" should be under "negative regulation of cohesion" but under cohesion. The cohesion cycle process would include both loading...
Hello, While discussing GO-CAM modeling guidelines with @ukemi @vanaukenk @thomaspd , we decided that we should go ahead and make some changes in the membrane terms, which have been problematic...