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Published
20 hours ago •
geneontology
geneontology
Add check for obsolete EC refs.
For #21347.
This PR will fail until existing obsolete EC xrefs are fixed:
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0002950 has an xref to an obsolete EC: "EC:2.7.8.n3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004121 has an xref to an obsolete EC: "EC:4.4.1.8"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004584 has an xref to an obsolete EC: "EC:2.4.1.130"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050136 has an xref to an obsolete EC: "EC:1.6.5.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008668 has an xref to an obsolete EC: "EC:2.7.7.58"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008769 has an xref to an obsolete EC: "EC:3.4.13.3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008940 has an xref to an obsolete EC: "EC:1.7.99.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016720 has an xref to an obsolete EC: "EC:1.14.99.33"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0019727 has an xref to an obsolete EC: "EC:1.1.1.32"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047138 has an xref to an obsolete EC: "EC:1.16.1.3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047228 has an xref to an obsolete EC: "EC:2.4.1.157"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047232 has an xref to an obsolete EC: "EC:2.4.1.164"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047442 has an xref to an obsolete EC: "EC:4.1.2.30"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047625 has an xref to an obsolete EC: "EC:2.5.1.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047826 has an xref to an obsolete EC: "EC:5.4.3.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047844 has an xref to an obsolete EC: "EC:3.5.4.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047847 has an xref to an obsolete EC: "EC:2.4.2.23"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047859 has an xref to an obsolete EC: "EC:4.3.1.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050027 has an xref to an obsolete EC: "EC:1.1.1.128"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050173 has an xref to an obsolete EC: "EC:2.7.7.54"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050213 has an xref to an obsolete EC: "EC:1.3.1.30"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050229 has an xref to an obsolete EC: "EC:1.1.1.246"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050271 has an xref to an obsolete EC: "EC:4.4.1.6"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050405 has an xref to an obsolete EC: "EC:2.7.11.27"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050444 has an xref to an obsolete EC: "EC:1.16.1.5"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050453 has an xref to an obsolete EC: "EC:1.16.1.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050548 has an xref to an obsolete EC: "EC:4.2.1.101"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0103111 has an xref to an obsolete EC: "EC:2.7.1.69"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0002950 has a definition xref to an obsolete EC: "EC:2.7.8.n3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003763 has a definition xref to an obsolete EC: "EC:3.6.4.9"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003851 has a definition xref to an obsolete EC: "EC:2.4.1.45"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003926 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003928 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003929 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003930 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003931 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003932 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0003936 has a definition xref to an obsolete EC: "EC:3.6.3.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004121 has a definition xref to an obsolete EC: "EC:4.4.1.8"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004221 has a definition xref to an obsolete EC: "EC:3.1.2.15"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004327 has a definition xref to an obsolete EC: "EC:1.2.1.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004442 has a definition xref to an obsolete EC: "EC:3.1.3.65"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004444 has a definition xref to an obsolete EC: "EC:3.1.3.61"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004495 has a definition xref to an obsolete EC: "EC:1.1.1.32"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004495 has a definition xref to an obsolete EC: "EC:1.1.1.33"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004584 has a definition xref to an obsolete EC: "EC:2.4.1.130"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0004809 has a definition xref to an obsolete EC: "EC:2.1.1.32"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050136 has a definition xref to an obsolete EC: "EC:1.6.5.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008563 has a definition xref to an obsolete EC: "EC:3.6.3.48"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008567 has a definition xref to an obsolete EC: "EC:3.6.4.2"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008570 has a definition xref to an obsolete EC: "EC:3.6.4.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008572 has a definition xref to an obsolete EC: "EC:3.6.4.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008575 has a definition xref to an obsolete EC: "EC:3.6.4.8"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008619 has a definition xref to an obsolete EC: "EC:3.6.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008668 has a definition xref to an obsolete EC: "EC:2.7.7.58"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008769 has a definition xref to an obsolete EC: "EC:3.4.13.3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008940 has a definition xref to an obsolete EC: "EC:1.7.99.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008985 has a definition xref to an obsolete EC: "EC:1.2.2.2"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0008988 has a definition xref to an obsolete EC: "EC:2.1.1.48"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0009481 has a definition xref to an obsolete EC: "EC:1.9.3.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0009482 has a definition xref to an obsolete EC: "EC:1.9.3.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0009483 has a definition xref to an obsolete EC: "EC:1.9.3.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0009485 has a definition xref to an obsolete EC: "EC:1.9.3.1"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0010277 has a definition xref to an obsolete EC: "EC:1.13.12.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015443 has a definition xref to an obsolete EC: "EC:3.6.3.15"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015596 has a definition xref to an obsolete EC: "EC:3.6.3.32"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015597 has a definition xref to an obsolete EC: "EC:3.6.3.21"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015600 has a definition xref to an obsolete EC: "EC:3.6.3.21"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015601 has a definition xref to an obsolete EC: "EC:3.6.3.21"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0015602 has a definition xref to an obsolete EC: "EC:3.6.3.22"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016146 has a definition xref to an obsolete EC: "EC:3.6.1.48"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016147 has a definition xref to an obsolete EC: "EC:3.6.1.48"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016148 has a definition xref to an obsolete EC: "EC:3.6.1.48"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016429 has a definition xref to an obsolete EC: "EC:2.1.1.36"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0016720 has a definition xref to an obsolete EC: "EC:1.14.99.33"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0017041 has a definition xref to an obsolete EC: "EC:3.2.1.47"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0018010 has a definition xref to an obsolete EC: "EC:2.3.1.96"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0018512 has a definition xref to an obsolete EC: "EC:1.3.1.59"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0018516 has a definition xref to an obsolete EC: "EC:1.3.1.63"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0019726 has a definition xref to an obsolete EC: "EC:1.1.1.33"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0019727 has a definition xref to an obsolete EC: "EC:1.1.1.32"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0031679 has a definition xref to an obsolete EC: "EC:1.6.99.6"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0030792 has a definition xref to an obsolete EC: "EC:2.1.1.138"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0036190 has a definition xref to an obsolete EC: "EC:1.14.13.137"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0036192 has a definition xref to an obsolete EC: "EC:1.14.13.139"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0036193 has a definition xref to an obsolete EC: "EC:1.14.13.140"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0045331 has a definition xref to an obsolete EC: "EC:1.12.99.2"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0046410 has a definition xref to an obsolete EC: "EC:2.5.1.64"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047138 has a definition xref to an obsolete EC: "EC:1.16.1.3"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047159 has a definition xref to an obsolete EC: "EC:2.3.1.104"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047193 has a definition xref to an obsolete EC: "EC:2.3.1.70"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047228 has a definition xref to an obsolete EC: "EC:2.4.1.157"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047232 has a definition xref to an obsolete EC: "EC:2.4.1.164"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047409 has a definition xref to an obsolete EC: "EC:3.3.2.5"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047442 has a definition xref to an obsolete EC: "EC:4.1.2.30"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047467 has a definition xref to an obsolete EC: "EC:5.2.1.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047625 has a definition xref to an obsolete EC: "EC:2.5.1.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047687 has a definition xref to an obsolete EC: "EC:1.13.11.13"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047826 has a definition xref to an obsolete EC: "EC:5.4.3.4"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047844 has a definition xref to an obsolete EC: "EC:3.5.4.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047847 has a definition xref to an obsolete EC: "EC:2.4.2.23"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0047859 has a definition xref to an obsolete EC: "EC:4.3.1.11"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050173 has a definition xref to an obsolete EC: "EC:2.7.7.54"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050213 has a definition xref to an obsolete EC: "EC:1.3.1.30"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050229 has a definition xref to an obsolete EC: "EC:1.1.1.246"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050271 has a definition xref to an obsolete EC: "EC:4.4.1.6"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050312 has a definition xref to an obsolete EC: "EC:4.4.1.12"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050405 has a definition xref to an obsolete EC: "EC:2.7.11.27"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050444 has a definition xref to an obsolete EC: "EC:1.16.1.5"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050548 has a definition xref to an obsolete EC: "EC:4.2.1.101"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0050555 has a definition xref to an obsolete EC: "EC:4.2.99.19"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0051777 has a definition xref to an obsolete EC: "EC:1.14.13.79"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0051778 has a definition xref to an obsolete EC: "EC:1.14.13.79"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0051779 has a definition xref to an obsolete EC: "EC:1.14.13.79"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0052606 has a definition xref to an obsolete EC: "EC:1.13.12.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0052607 has a definition xref to an obsolete EC: "EC:1.13.12.14"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0061597 has a definition xref to an obsolete EC: "EC:4.1.99.18"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0090489 has a definition xref to an obsolete EC: "EC:1.14.13.125"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0102014 has a definition xref to an obsolete EC: "EC:3.6.3.17"
- [ ] ERROR: http://purl.obolibrary.org/obo/GO_0103111 has a definition xref to an obsolete EC: "EC:2.7.1.69"
