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Published 20 hours ago • verified publisher icon geneontology

Term merge: GO:0052846 and GO:0101012

Open manulera opened this issue 2 years ago • 4 comments

  • Term to be merged: GO:0101012: inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate 1-diphosphatase activity

  • Which term do you propose this term merge into? GO:0052846: inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity

  • Reason for merge: I think they are identical

  • Reference(s) PMID:26422458, PMID:10827188

  • Any other information https://www.ebi.ac.uk/QuickGO/term/GO:0101012 https://www.ebi.ac.uk/QuickGO/term/GO:0052846

cc: @ValWood

manulera avatar Oct 12 '22 12:10 manulera

Hi,

Thanks for reporting this. I merged the terms and used the parent of GO:0052846, GO:0052841 inositol bisdiphosphate tetrakisphosphate diphosphatase activity as the superclass.

Thanks, Pascale

pgaudet avatar Oct 13 '22 10:10 pgaudet

Thanks! Closing

manulera avatar Oct 13 '22 11:10 manulera

Thanks, but in our procedure the ticket gets closed automatically after the checks: https://github.com/geneontology/go-ontology/pull/24184

It's useful not to close manually, as if the checks fail we know that the ticket is not really completed.

(in this case the tests should pass ;)

pgaudet avatar Oct 13 '22 11:10 pgaudet

@manulera @pgaudet @ValWood I think a similar merge may apply to these two terms?:

inositol 1-diphosphate 2,3,4,5,6-pentakisphosphate 1-diphosphatase activity (GO:0101011) Def: myo-inositol 1-diphosphate 2,3,4,5,6-pentakisphosphate + H2O = myo-inositol hexakisphosphate + phosphate. PMID:26422458

and

inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity (GO:0052843) Def: inositol 1-diphosphate 2,3,4,5,6-pentakisphosphate + H2O = inositol 1,2,3,4,5,6-hexakisphosphate + phosphate + 2 H+. PMID:10827188 PMID:11502751

sjm41 avatar Oct 13 '22 11:10 sjm41