Obsolete 'actin filament polymerization involved in x' terms

[pgaudet]

Dear all,

The proposal have been made to obsolete the following 'actin filament polymerization involved in x' terms. The reason for obsoletion is that the information should be captured as a GO-CAM.

GOID	Term label	Number of annotations	Group
GO:1903478	actin filament bundle convergence involved in mitotic contractile ring assembly	4	PomBase
GO:1904670	actin filament polymerization involved in mitotic actomyosin contractile ring assembly	4	PomBase
GO:0030037	actin filament reorganization involved in cell cycle	7	1 SGD + 6 FlyBase
GO:0070359	actin polymerization-dependent cell motility involved in migration of symbiont in host	1	UniProt-EBI
GO:1903481	negative regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly	0
GO:0120172	positive regulation of actin filament bundle convergence involved in mitotic contractile ring assembly	2	PomBase
GO:0061955	positive regulation of actin filament depolymerization involved in acrosome reaction	0
GO:1903482	positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly	2	PomBase
GO:0060475	positive regulation of actin filament polymerization involved in acrosome reaction	0
GO:0061954	positive regulation of actin filament polymerization involved in sperm capacitation	0
GO:0120173	regulation of actin filament bundle convergence involved in mitotic contractile ring assembly	0
GO:1903117	regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assembly	0
GO:1903480	regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly	2	PomBase

• [x] To check:

• Mappings: GO:0030037is mapped to MIPS_funcat (deprecated)
• Slims: None

Thanks, Pascale

[ValWood]

can we keep this one

GO:1903478 | actin filament bundle convergence involved in mitotic contractile ring assembly

and change to

GO:1903478 | mitotic contractile ring actin filament bundle convergence

this is a sub process in ring assembly

[ValWood]

It seems that the obsoletion notice went out but this wasn't completed

[ValWood]

I'd like to keep GO:1903478 for now , relabelled, but it might be possible to eventually get rid of it and replace by MF terms

[ValWood]

probably regulation of actin filament polymerization should go too. This can be described by activities.

[raymond91125]

GOID	Number of annotations	Status
GO:1903478	0 EXP	x
GO:1904670	0 EXP	x
GO:0030037	7 EXP	https://github.com/geneontology/go-annotation/issues/4409
GO:0070359	0	OBSOLETED
GO:1903481	0	x
GO:0120172	0	x
GO:0061955	0	x
GO:1903482	0	x
GO:0060475	0	x
GO:0061954	0	x
GO:0120173	0	x
GO:1903117	0	x
GO:1903480	0	x

[pgaudet]

probably regulation of actin filament polymerization should go too. This can be described by activities.

his should be a separate ticket - there are a bout 200 EXP annotations to these regulation terms, plus several children.