zarr-R

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Cannot install on R 4.0.3, macOS 10.15.5

4

Hi, thanks for starting this effort to create an R wrapper around the z5 API. I am having some issues installing. I have just tried to use `devtools::install_github`. Is this...

keller-mark

- [ ] currently tests pass but travis fails, because of undocumented functions and some other CRAN requirements. - [ ] the resulting .so file is huge, this can be...

gdkrmr

gdkrmr

`z5::multiarray::{read,write}Subarray` does not work correctly for `xt::rarray`

1

The following does not read or write the data correctly when complete chunks are read in, as in #10: https://github.com/gdkrmr/zarr-R/blob/31c4176bcba8b841080d56abed231d2c8f773cd3/src/xtensor-read.cpp#L167 ```C // xt::rarray array(shape_); // z5::multiarray::readSubarray(*ds, array, offset_.begin()); // res...

gdkrmr

Doesn't compile on windows

1

gdkrmr

Loading the library doesn't work with `-O0` because of some symbol missing.

gdkrmr

The json headers should be in their own R package

gdkrmr

The api is *not* stable yet and will be reworked!

gdkrmr

something like `chunk(zarr)[1, ]` to return entire chunks for more efficient access.

gdkrmr