Gavin Ha

Hi Krunal, You should be able to use ichorCNA for your data. You do not need matched normals to analyze your samples. If you wish to use a panel of...

Hi Krunal, 1. 15 normal samples is a good start. The way that the PoN is used isn't sophisticated at the moment. More samples could help but it may not...

Hi Krunal, Sorry for the delay. Looking at the profile in the PDF that you attached, it looks like there are clearly copy number alterations. One thing I can bring...

Hi @JJMaggie This is the only solution that is produced so it will select it by default. You should consider generating more solutions so that either you or ichorCNA can...

Hi @heqisun Have you installed the `ichorCNA` package in R? Are you able to load it from within R? Try ``` library(ichorCNA) > getSeqInfo ``` It should print out the...