taxondna

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I have a problem running Sequence Matrix on mac with big sur, it does not open at all.

2

RomiBRC

problem running SquenceMatrix on windows11 64x

1

I been trying to run SquenceMatrix on my pc and I am having a problem with it... I did upgrade the java version of my pc to the must recent...

avalerioc

problems to write Species name for the analysis

1

Hi, I have problems writing the species names in the sequences option. I use a Mac OS 12.3.1 with java 8 but I don't know why it is not working.

Cyberia1978

Exclude loci or taxa from data export if they did not sequence/capture above a threshold

2

Export option to exclude loci not present in X% of taxa. Export option to exclude taxa with fewer than X % of loci. It should be possible to use both...

djlohman

Error while trying to open despite following advice

4

Good day, I hope this message finds you well. I am trying to create a matrix for all my separate gene alignments from a multiple sequence alignment run. After successfully...

NicolasLouw

Remove the prohibition on importing sequence files in which the sequences have different lengths (usually because they are not aligned). This would allow adding new taxa with multiple loci simultaneously....

djlohman

Add the ability to undo the last action (such as deleting a taxon or column)

djlohman

This PR collects several minor changes proposed by @djlohman. - Renamed menu items in the "Export" menu. - Deactivated "Display pairwise distances" menu item in the right-click menu.

gaurav

Good day, Sorry for already posting another issue, but I went through all the issues and I could not find another posted issue that is similar enough to mine. Right...

NicolasLouw

SequenceMatrix recognizes BEGIN SETS; as a block with partition information, but should also recognize BEGIN CHARSETS; which it currently does not, even though it asks the question: Do you want...

djlohman