GATK workflows

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Results 13 repositories owned by GATK workflows

gatk4-rnaseq-germline-snps-indels

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Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools

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gatk4-somatic-cnvs

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This repo is archived, these workflows will be housed in the GATK repository under the scripts directory. These workflows are also organized in Dockstore in the GATK Best Practices Workflows collectio...

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seq-format-conversion

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Workflows for converting between sequence data formats

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