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(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend

Github actions tests reported job failures from actions build [3300297321](https://github.com/broadinstitute/gatk/actions/runs/3300297321) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

(Do not merge) Port of nvscorevariants into GATK, with a basic tool frontend

Github actions tests reported job failures from actions build [3300316784](https://github.com/broadinstitute/gatk/actions/runs/3300316784) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

new PasteDepthEvidence tool

Github actions tests reported job failures from actions build [3255713647](https://github.com/broadinstitute/gatk/actions/runs/3255713647) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

new PasteDepthEvidence tool

Github actions tests reported job failures from actions build [3255830437](https://github.com/broadinstitute/gatk/actions/runs/3255830437) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

new PasteDepthEvidence tool

Github actions tests reported job failures from actions build [3257265858](https://github.com/broadinstitute/gatk/actions/runs/3257265858) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

new PasteDepthEvidence tool

Github actions tests reported job failures from actions build [3259842595](https://github.com/broadinstitute/gatk/actions/runs/3259842595) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Subsetting for A-length annotations (e.g. AF, PRI, F1R2, F2R1),

Travis reported job failures from build [38115](https://app.travis-ci.com/broadinstitute/gatk/builds/247937100) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- | ------ | ----...

Subsetting for A-length annotations (e.g. AF, PRI, F1R2, F2R1),

Github actions tests reported job failures from actions build [2203889963](https://github.com/broadinstitute/gatk/actions/runs/2203889963) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Subsetting for A-length annotations (e.g. AF, PRI, F1R2, F2R1),

Github actions tests reported job failures from actions build [2340788459](https://github.com/broadinstitute/gatk/actions/runs/2340788459) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...

Added gCNV integration test to detect numerical differences in the outputs.

Github actions tests reported job failures from actions build [2762081645](https://github.com/broadinstitute/gatk/actions/runs/2762081645) Failures in the following jobs: | Test Type | JDK | Job ID | Logs | | --------- |---- |...