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`iczt(X)` is numerical unstable and return nan when `len(X)` is too big (arround > 5000), fix suggestion included

Open mammalwong opened this issue 1 year ago • 1 comments

version of czt: 0.0.7, issue was found when using google colab. To reproduce the issue:

import numpy as np
import czt as czt
for n in [1000,10000]:
  x = np.linspace(-4,4,n)
  y = np.exp(-x**2)
  yhat = czt.czt(y,simple=False)
  yphi = czt.iczt(yhat,simple=False)
  print(np.any(np.isnan(yhat)),np.any(np.isnan(yphi)))

outputs:

False False
False True

expected result:

False False
False False

mammalwong avatar Jul 16 '24 16:07 mammalwong

suggested fix (tested in google colab locally) The np.cumprod call in the below lines of the source of iczt caused this numerical instability issue, it makes many tailing entries in p become 0:

    p = np.r_[1, (W ** k[1:] - 1).cumprod()]
    u = (-1) ** k * W ** (k * (k - n + 0.5) + (n / 2 - 0.5) * n) / p
    # equivalent to:
    # u = (-1) ** k * W ** ((2 * k ** 2 - (2 * n - 1) * k + n * (n - 1)) / 2) / p
    u /= p[::-1]

it can be solved by modifying the above few lines like this:

    u = (-1) ** k * W ** (k * (k - n + 0.5) + (n / 2 - 0.5) * n) # /p is removed from here (1)
    p = np.r_[1, W ** k[1:] - 1]
    lp = np.abs(p) # lp stand for ln(p)
    lp = np.cumsum(np.log(lp)) + np.angle(np.cumprod(p/lp))*1j
    # above seperate the magnitude and angle of the entries in p
    # it cumsum magnitude in log domain to replace the unstable cumprod of the magnitude
    # and cumprod only the normalized angle to ensure the angle is also stable when X is long
    u /= np.exp(lp+lp[::-1]) # /p from (1) is moved to here as +lp in exp()

mammalwong avatar Jul 16 '24 16:07 mammalwong

Thanks for point this out and sorry it took so long to get back to you.

I added your code to commit 96fdc262238bcccd703da92fc1eb99b1f58bcd02.

garrettj403 avatar Dec 20 '24 07:12 garrettj403

Thanks for the acknowledgement.

在 2024年12月20日週五 15:13,John Garrett @.***> 寫道:

Thanks for point this out and sorry it took so long to get back to you.

I added your code to commit 96fdc26 https://github.com/garrettj403/CZT/commit/96fdc262238bcccd703da92fc1eb99b1f58bcd02 .

— Reply to this email directly, view it on GitHub https://github.com/garrettj403/CZT/issues/17#issuecomment-2556420219, or unsubscribe https://github.com/notifications/unsubscribe-auth/AGY3BIYT757EHPLFXSIO2M32GO7TBAVCNFSM6AAAAABK66R42KVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDKNJWGQZDAMRRHE . You are receiving this because you authored the thread.Message ID: @.***>

mammalwong avatar Dec 20 '24 07:12 mammalwong