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C stack usage 7972740 is too close to the limit

Open xiekunwhy opened this issue 1 week ago • 3 comments

Hi,

I got following errors when using ggVennDiagram, do you known why?

library(ggplot2)
library(ggVennDiagram)
vdat <- read.table(infile, header = F, stringsAsFactors = F)
ids <- unique(vdat$V1)
df1 <- list()
for (id in ids) {
  print(id)
  df1[[id]] <- unique(vdat[vdat$V1 == id,][,2])
}
print(str(df1))
List of 5
 $ KOG      : chr [1:25551] "mikado.Hap1_chr1G1" "mikado.Hap1_chr1G2" "mikado.Hap1_chr1G3" "mikado.Hap1_chr1G4" ...
 $ GO       : chr [1:34959] "mikado.Hap1_chr1G1" "mikado.Hap1_chr1G10" "mikado.Hap1_chr1G100" "mikado.Hap1_chr1G1000" ...
 $ NR       : chr [1:41937] "mikado.Hap1_chr1G1" "mikado.Hap1_chr1G2" "mikado.Hap1_chr1G3" "mikado.Hap1_chr1G4" ...
 $ SwissProt: chr [1:29362] "mikado.Hap1_chr1G1" "mikado.Hap1_chr1G2" "mikado.Hap1_chr1G3" "mikado.Hap1_chr1G4" ...
 $ KEGG     : chr [1:13215] "mikado.Hap1_chr1G100" "mikado.Hap1_chr1G1000" "mikado.Hap1_chr1G10000" "mikado.Hap1_chr1G10003" ...
NULL

ggVennDiagram(df1, label="count", label_alpha=0, edge_size=0.4)

Error: C stack usage  7972740 is too close to the limit
In addition: There were 50 or more warnings (use warnings() to see the first 50)
Execution halted

Best, Kun

xiekunwhy avatar Jun 24 '24 02:06 xiekunwhy