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The demo dataset to re-run the example

Open honghh2018 opened this issue 3 years ago • 3 comments

Hi Dr. Thanks to develop the great tools. I want to use your data to test the pipeline for further analysis myself data. but i can not get the data example -../../Datasets/data/Lawlor/data.h5-you show in the vignette's page: https://cblast.gao-lab.org/doc-latest/_static/BLAST.html. Even though, you demonstration already very well for me, but in few step i can not how to use my data to run the cell_blast in my data myself, without firstly running the whole pipeline that you show in the webpage. I hope the dataset "data/Lawlor/data.h5" can be download for me to re-run again the cell_blast pipeline, if you could. Best, hanhuihong

honghh2018 avatar May 27 '21 11:05 honghh2018

can anyone hear this?

honghh2018 avatar May 28 '21 01:05 honghh2018

It would be appreciated, if you do me a favor.

honghh2018 avatar Jun 03 '21 07:06 honghh2018

@honghh2018 Check this issue

Sorry for the delayed response. The h5 files can be found at https://cblast.gao-lab.org/download. You can click the dataset names (first column) there to download the h5 files.

RuiyuRayWang avatar Dec 06 '21 12:12 RuiyuRayWang