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Gene cluster comparison figure generator
Hi Cameron, is there a way I can check the cluster similarity matrix raw data? 
Hello, I wrote a script that would automatically take pairs of GBK files and run clinker on them, as I am comparing multiple gene-clusters to each other. My problem is...
Having issues in visualization of plot on internet explorer after the run is completed. I am using the gene bank files generated by RAST server and using four plasmid sequence...
In order to reduce clutter I wish to show labels for selected genes only. To this end, I created /note tags only for those genes and set gene label type...
Some gene models with high similarity scores remain grey. What could potentially cause this issue? 
Hi cameron, just came across another bug where a fasta file without any line wrapping results in an empty display: Using a fasta formatted file with line wrapping works:
Hi Cameron, I just came across a small issue that took me awhile to fix. Apparently, if `clinker` is given a genbank file with only one field per CDS, say...
Often we have a (prokka-generated) Genbank file, but only want to use a small subsection of it in Clinker. I don't know how easy it would be, but could an...
Hey, I was working on a linear comparison of plasmid sequences and I wonder if there is a way to incorporate a possibility to show mobile genetic elements (IS, Tn)...
Hey, I was assembling IncF plasmids lately. I wanted to do a figure of a region responsible for conjugative transfer and these plasmids have more genes disrupted by ISs. It...
