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Advanced workflow tips/tricks FAQ / mini tutorial

Open bernt-matthias opened this issue 1 year ago • 6 comments
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Lets start with an idea collection that we may turn into FAQ list or mini tutorial:

  • Run a tool based on the presence or absence of an optional input. See https://github.com/galaxyproject/galaxy/pull/17271#issuecomment-1946295790
  • Conditional steps
  • Map over a tool (input) that does not map over
  • Updating subworkflows
  • Best practices panel

bernt-matthias avatar Feb 19 '24 09:02 bernt-matthias

Would love to see this @bernt-matthias ! short tutorials are absolutely welcome, especially if you can provide a useful scenario where someone would want to do this

hexylena avatar Feb 19 '24 09:02 hexylena

Ah chasing down the comment https://github.com/galaxyproject/galaxy/pull/17271#issuecomment-1952074678 agreed @mvdbeek !! Would love to see more short tutorials in the form of "Are you in this situation? Example of situation, resolution via workflow", it'd really manage to expose this to a lot more folks!

hexylena avatar Feb 19 '24 09:02 hexylena

provide a useful scenario where someone would want to do this

this is near impossible if you also want to be concise, I don't think that should hold us back in creating a resource though for those people that know what they want to do ... which I think is what FAQs are for.

mvdbeek avatar Feb 19 '24 09:02 mvdbeek

That's fair, no, don't let it hold you back.

More just if you created the feature, or needed the feature for a specific scenario, you might already have such a scenario in your mind, and it'd help readers connect it to real-world use cases a bit better.

hexylena avatar Feb 19 '24 10:02 hexylena

See also https://github.com/galaxyproject/training-material/pull/3660

simonbray avatar Feb 22 '24 13:02 simonbray

cc @jennaj @Delphine-L, we had questions on conditionals in workflows in the intro training, people want to know how :)

hexylena avatar Jun 24 '24 12:06 hexylena