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Apollo for eukaryote genomes

Open abretaud opened this issue 1 year ago • 0 comments

Hey! A new tutorial for Apollo, somewhat similar to the existing one except:

  • uses a eukaryote genome (instead of bacteria), the same one as in the repeatmasker and funannotate tutorials
  • it means different evident tracks, and isoforms/utr stuff
  • I added a CYOA to make the galaxy <-> apollo interaction optional: sometimes I just want to teach Apollo for users and let them use the same org that I have precreated for them

If the CYOA works well I could probably do the same for the other apollo tutorial

A little question: there's no way currently to make the TOC adapt to CYOA choice? I managed to avoid the problem somehow, but it could be useful

I plan to test this new tuto for https://lepidoptera-2022.workshop.inrae.fr in the august 22-26 week

While I was at it, I've also reorganized the genome-annotation topic index page to make it tidier:

image

abretaud avatar Jul 28 '22 15:07 abretaud