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Apollo todo list after the aussie apollo workshop

Open hexylena opened this issue 3 years ago • 2 comments

  • [ ] Let's update the apollo slide deck to give a bit more time to moving around, controls, etc.
  • [ ] We need to add sixpack to the GTN tutorial datasets, that'll give a better demo in some places, and we should add sections on blat/sequence search track/when you'd use either of those
  • [ ] Apollo advanced? Cover some more advanced aspects like report tab and management of organisms?

xref https://github.com/gallantries/organisation/issues/22

hexylena avatar Nov 24 '21 09:11 hexylena

Thanks for writing it here! While preparing the funannotate tutorial, I also think we could have a nice learning path with a real eukaryote genome: PacBio QC tutorial -> assembly with flye -> repeatmasking with repeatmasker -> annotation with funannotate -> manual curation with apollo

abretaud avatar Nov 24 '21 09:11 abretaud

Yes! That's a fantastic plan, great reference learning path for us to use

hexylena avatar Nov 24 '21 09:11 hexylena