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velvet: add OMP_THREAD_LIMIT

Open bernt-matthias opened this issue 2 years ago • 1 comments

if not set the roadmap files (and assemblies?) differ when using different numbers of cores

see also https://www.biostars.org/p/86907/

.. does not work for 1 CPU https://github.com/dzerbino/velvet/issues/56

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bernt-matthias avatar Jul 04 '22 13:07 bernt-matthias

Yes, still a draft. Trying to figure out upstream how to fix this correctly. See linked issue.

bernt-matthias avatar Jul 05 '22 09:07 bernt-matthias