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FOR CONTRIBUTOR: * [X] - I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [X] - License permits unrestricted use (educational + commercial)...

Updating the recentrifuge tool for : - edam number - little option in the html output which render 1 html file with all samples

Hello, I have tried to create an .xml wrapper for GetOrganelle https://github.com/Kinggerm/GetOrganelle. I think this is a useful tool and it would be great if it was widely accessible on...

new software

https://github.com/blahah/transrate Conda package and container is available. Looks like a good candidate for a starter. ``` Transrate v1.0.3 by Richard Smith-Unna, Chris Boursnell, Rob Patro, Julian Hibberd, and Steve Kelly...

tool request

Hello! This is an automated update of the following tool: **tools/shasta**. I created this PR because I think the tool's main dependency is out of date, i.e. there is a...

Currently, datasets from collections are processed together. This behavior should be modified in order to assemble each dataset from the collections independently.

bug

FOR CONTRIBUTOR: * [x] - I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [x] - License permits unrestricted use (educational + commercial)...

Referenceseeker is a tool which calculate ANI score and determine close reference genome to a query. Could be interesting for ANI score --> close species determination and reference genome could...

tool request

[Vapor](https://github.com/connor-lab/vapor) is a tool to classify Influenza samples from raw short read sequence data.

tool request