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Annovar produces green empty dataset when output set to VCF
Details reported in dataset info field:
Log: tool progress Log: tool progress Unknown option: vcfinput Usage: table_annovar.pl [arguments]
Optional arguments: -h, --help print help message -m, --man
Executing the same exact job with tabular output is successful.
Modification was added here: https://github.com/galaxyproject/tools-devteam/pull/109
Where using "vcfinput" versus "vcfoutput" was discussed.
Reported by: https://biostar.usegalaxy.org/p/15686/