changed default location of integrated_tool_panel.xml

[bernt-matthias]

I guess it should be in config/ instead of the Galaxy root

[jmchilton]

Unit test failures appear to be legitimate, marking as WIP for that reason. @natefoo / @mvdbeek are you okay with moving this? I mean we put mutable stuff in both Galaxy root and config currently - I'm not sure I find a compelling reason to prefer one over the other.

If there is a consensus around making this change though I can fix the unit tests and get this merged.

[mvdbeek]

Sure, seems fine to me. Should we recover integrated_tool_panel.xml from the root dir if it exists there but not in config/ ?

[natefoo]

I wasn't even aware that it wasn't in config/. I think somewhere in database/ (say database/config/?) actually makes more sense (I call this the "mutable" config/data dir in the Ansible stuff), because ideally config/ is only for stuff an admin writes. The other Galaxy-written configs should also go wherever integrated_tool_panel.xml goes, but those probably aren't something we should change except for new installs.

[nsoranzo]

This was moved to managed_config_dir long ago.