galaxy-language-server

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Bumps [black](https://github.com/psf/black) from 22.12.0 to 24.3.0. Release notes Sourced from black's releases. 24.3.0 Highlights This release is a milestone: it fixes Black's first CVE security vulnerability. If you run Black...

dependabot[bot]

Discussion at the BioHackathon: Would it be useful for tool developers to get suggestions of bio.tools terms? There's an API here: https://biotools.readthedocs.io/en/latest/api_reference.html @matuskalas @hmenager please feel free to add other...

beatrizserrano

* --threads and GALAXY_SLOTS * creator (or could be in the standard tool) * output with `change_format` * text param with options * repeat * paird-collection conditional

bgruening

... that have been introduced here https://github.com/galaxyproject/galaxy/pull/13152

bernt-matthias

This can be a custom command to detect and automatically remove those attributes which value is the same as the default. For example: ```xml ``` will be automatically reduced to:...

davelopez

vscode extension launching a single test

6

Hi, It seems that running a single test does not launch any action for me:  While running all tests work:  Is it me? Thanks

lldelisle

The current validation of the tool documents is based on the [Galaxy XML Schema Definition](https://github.com/galaxyproject/galaxy/tree/dev/lib/galaxy/tool_util/xsd). There are some validation rules that are interesting to have to better comply with the...

davelopez

Display Live Tool UI during development

3

It would be nice to have the ability to see the tool UI rendered beside the code as you made some tweaks with the parameters, the help, etc. as @hexylena...

davelopez

It would be helpful to have some more detail on how the `tests` and the `command` section is automatically generated and add it to the readme or wiki. Ref #105

davelopez

tool snippet gives linter errors

3

More an planemo / galaxy issue but I guess its good to keep track here: ``` Applying linter xml_order... CHECK .. INFO: Unknown tag [xrefs] encountered, this may result in...

bernt-matthias