FRASER
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Merging Multiple Samples
Dear C. Mertes,
I would like to run FRASER on a dataset of 47 BAM files. However, when running the countRNAData function I keep getting out of memory errors. Is it possible to run fds <- countRNAData(createTestFraserSettings())
on each sample individually, and then merge the resulting fds objects? If not, do you know how I can best get around this issue? Thanks in advance!
Hi, you would have to run it in a cluster. You can count one sample at a time if needed.