bioruby-pipengine
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Introduce the <sample_group> place holder.
Fix a bug with the processing of the <sample_path>
placeholder when there are multiple instances
I suspect that if there are multiple <sample_path>
<sample_path>SomethingAttached
only the second placeholder will be subsituted, the first one will not.
for <sample_group>
I changed using the unless and try to substitute for the simpler placeholder
in any case.
Introduce the ability to set the group name for the stdout and stderr for the PBS output file (those bound strictly to the submitting user ) so that their permission will be set to the user group decided by the user.