"--output-rnames" parameter in force calling

[Meltpinkg]

Hello!

I'm using Sniffles2 v2.0.7 to implement force calling in my work. And I found the parameter "--output-rnames" can help outputing names of all supporting reads. But when I implemented force calling with this parameter, I didn't see this field in the output vcf. So is there any way to get this information (RNAMEs) in force calling? Many thanks!

Shuqi

[fritzsedlazeck]

Oh good point. I dont think we ever tested this.. Let me mark this as a bug and we will try to resolve this soon. Thanks Fritz