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Published 20 hours ago • verified publisher icon freesunshine0316

experimental data

Open sdzhangbo opened this issue 5 years ago • 5 comments

This paper inspired me a lot. However, I got some trouble when I try to follow your work, because I can not obtain the experimental data, BioCreative VI CPR and Phenotype-Gene relation on the Internet (the link of data in the paper cannot be opened). Could you please send me the experimental data?

sdzhangbo avatar Dec 23 '19 14:12 sdzhangbo

Thanks for being interested in our work. You may download the data through https://www.cs.rochester.edu/u/lsong10/downloads/cpr.zip and https://www.cs.rochester.edu/u/lsong10/downloads/pgr.zip I also attach my script for preprocessing. It uses handle rules to pre-tokenize some special entities, which cannot be tokenized by a standard tokenizer. But, we just realized recently that this could be done in a smarter way that simply pre-tokenize using the provided character-based position information. You may improve this tokenizer for better performances.

freesunshine0316 avatar Dec 23 '19 21:12 freesunshine0316

I have downloaded the experimental data through the links above. Thank you so much for your detailed help and kind suggestions on preprocessing.

sdzhangbo avatar Dec 24 '19 02:12 sdzhangbo

Sorry to disturb you, I am very interested in your work, but I can't open the above URL to get the data, can you provide the data again？Thank you very mucn.

ysn7 avatar Nov 12 '20 09:11 ysn7

I'll try to upload the data somewhere else later on.

freesunshine0316 avatar Nov 13 '20 01:11 freesunshine0316

I'll try to upload the data somewhere else later on.

thank you very much. Did you upload successfully?

ysn7 avatar Nov 16 '20 07:11 ysn7