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Requesting Docker container

Open Gurado opened this issue 10 years ago • 4 comments

Hi,

Annocript looks like a great tool but the effort to get everything installed it is substantial. It would be great if you could provide a Docker container or a VM. That would certainly reduce the barrier for your peers give it a try.

Cheers!

Gurado avatar Jun 11 '15 12:06 Gurado

Hi Gurado,

thanks for your comment and your suggestion. A Docker seems a nice idea. We will plan in a future version to introduce something like this to reduce the user time for the installation.

Francesco

frankMusacchia avatar Jun 13 '15 13:06 frankMusacchia

Hi Francesco, did you create a docker image for annocript ? The annocript installation process is not compatible with my company's system architecture complexity... But we are really interested to test your tool ! It would also be a good idea to work on a galaxy wrapper solution. Regards, Laure

laure182 avatar Feb 03 '17 10:02 laure182

Dear Laure,

we didn't implemented that yet. I know the installation procedure is an obstacle sometime and the docker image could be a good idea to fill the gap. We were planning to make an update this spring. Do you know if anyone can add tools in Galaxy ? They should have their own API for that.

Thanks for the suggestion,

Best regards,

Francesco

Il giorno 03 feb 2017, alle ore 11:01, Laure Quintric [email protected] ha scritto:

Hi Francesco, did you create a docker image for annocript ? The annocript installation process is not compatible with my company's system architecture complexity... But we are really interested to test your tool ! It would also be a good idea to work on a galaxy wrapper solution. Regards, Laure

— You are receiving this because you commented. Reply to this email directly, view it on GitHub, or mute the thread.

frankMusacchia avatar Feb 04 '17 20:02 frankMusacchia

Francesco,

Anyone can add tools to Galaxy, just have to implement the wrapper with planemo.

I'll wait for your update and your docker image.

Laure

Le 04/02/2017 à 21:44, Francesco a écrit :

Dear Laure,

we didn't implemented that yet. I know the installation procedure is an obstacle sometime and the docker image could be a good idea to fill the gap. We were planning to make an update this spring. Do you know if anyone can add tools in Galaxy ? They should have their own API for that.

Thanks for the suggestion,

Best regards,

Francesco

Il giorno 03 feb 2017, alle ore 11:01, Laure Quintric [email protected] ha scritto:

Hi Francesco, did you create a docker image for annocript ? The annocript installation process is not compatible with my company's system architecture complexity... But we are really interested to test your tool ! It would also be a good idea to work on a galaxy wrapper solution. Regards, Laure

— You are receiving this because you commented. Reply to this email directly, view it on GitHub, or mute the thread.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/frankMusacchia/Annocript/issues/3#issuecomment-277476419, or mute the thread https://github.com/notifications/unsubscribe-auth/AIKOOeg1mGynBnHDXH_MkEkefDzKp7Deks5rZONDgaJpZM4E_rms.

laure182 avatar Feb 07 '17 07:02 laure182