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Trouble downloading FOOOF to Ananconda 3 environment
Hey all, I would be grateful if you could resolve this issue for me.
I am using the conda command line to install FOOOF in my system:
$ conda install -c conda-forge fooof
And somehow it is installing only in the Base environment, but not Ananconda3, which is creating downstream issues with MATLAB wrapper (screenshot attached). I am suspecting this is the reason why FOOOF is not working for MATLAB since the 'pyenv' in MATLAB links to the ANACONDA3 files and not the base.
Can someone help me out with this?
Hi @kkauraiims, I think you need to activate the anaconda3 environment first, before installing fooof from conda forge:
$ conda activate anaconda3
$ conda install -c conda-forge fooof
Thanks @ryanhammonds!! Unfortunately, I am getting bugs for both commands. The conda activate doesn't seem to be working, and while activating FOOOF I am getting warnings in the output code. I have attached screenshots of both, any help in this regard would be useful, since I am not able to use FOOOF in MATLAB at all.
@kkauraiims I am not using anaconda but pyenv to create virtualenvs, but I think this is a more general problem how Matlab handles interaction with python, not related to fooof, maybe something from this page help you https://nl.mathworks.com/matlabcentral/answers/325435-python-api-setup-environments-how-to-get-matlab-to-use-other-env-as-interpeter
(basically you need to point Matlab to the specific virtual environment you installed fooof)
Remember to use specific Python version supported by your Matlab
https://www.mathworks.com/content/dam/mathworks/mathworks-dot-com/support/sysreq/files/python-compatibility.pdf
About creating conda env and the error you are getting , I think there something not right with the write rights to folder you are installing env with fooof, check this disusssion https://stackoverflow.com/a/59750131 You might need to change access rights to this folder
Hey @kkauraiims - since this is a question mostly about Anaconda environments (and old & likely to be outdated), I'm going to close this now. If you still have questions about getting fooof installed / running, feel free to comment / reopen, and we can try and help.
