Flux try to change permission of executable files in repository when re-bootstraping them same repository

[duynguyende]

Describe the bug

In my repository there are two executable files: create-ecr-repository.sh and pants. Normally they are excuted but when I have to re-bootrap this repository, somehow these files permission are changed, so my CI/CD pipeline can not execute these files.

Steps to reproduce

1. flux bootstrap (bootrap a repository).
2. Add some executable files.
3. flux bootstrap [created_repository_in_step_1]

Expected behavior

Permissions of pants and create-ecr-repository.sh aren't changed

Screenshots and recordings

No response

OS / Distro

Linux

Flux version

0.27.2

Flux check

N/A

Git provider

No response

Container Registry provider

No response

Additional context

No response

Code of Conduct

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