How to Rename Labels in a Flair Dataset?[Question]:

[DonaldFeuz]

Question

Hello,

I want to fine-tune HunFlair-Gene on the JNLPBA dataset, but I am getting mostly null scores during training.

I believe this is because the dataset does not contain gene mentions but rather mentions of proteins and other labels. I tested my code on a dataset that contains only gene labels (BC2GM) and obtained good results.

To solve my problem, I tried loading the JNLPBA dataset from flair.datasets using:

from flair.datasets import JNLPBA

Load the JNLPBA dataset

jnlpba_dataset = JNLPBA()

Then, I attempted to rename the protein labels to "Gene" and remove the other labels, but it appears that Flair does not provide the ability to rename labels in a dataset.

How can I work with JNLPBA to compare my scores with those of HunFlair?

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