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Published 20 hours ago • verified publisher icon fkallen
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CARE: Context-Aware Read Error correction for Illumina reads

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subsetting reads from large genome

It seems likely that the deeper the coverage, the better the read correction will work, but I'm working with a large genome (>20 Gb haploid complement) so RAM is a...

rwhetten avatar rwhetten

conda package

Hi, Thanks for the nice tool. Im having trouble installing on a server, I think due to old g++ (--version 4.8.5). Is there are chance CARE could be added to...

kcleal avatar kcleal

Candidate correction does not work in the GPU version with CUDA 12.3

Don't use `--candidateCorrection` with CUDA 12.3 CUDA 12.1 works fine.

fkallen avatar fkallen

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CARE: Context-Aware Read Error correction for Illumina reads

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