fereshtehizadi

Excuse me I tried these ``` > cellrouter View(metadata) > cellrouter cellrouter ``` my seurat metadata has 4 columns nGene, nUMI, orig.ident and res.0.7

Excuse me, ``` > data cellrouter metadata cellrouter cellrouter > cellrouter ```

Sorry, ``` > > cellrouter cellrouter

Sorry , I have never been able to trace the tutorial without stopping by error that is why I am disturbing you ``` > cellrouter cellrouter class(cellrouter@ndata) [1] "data.frame" >...

Thank you, Likely I have both already installed ``` > library('cccd') > > library('proxy') > ```

Sorry I am starting the tutorial but I am being stopped by this error firstly ``` > cellrouter cellrouter plot(cellrouter@pca$sdev, xlab='PC', ylab='Standard d\ + > plot(cellrouter@pca$sdev, xlab='PC', ylab='Standard deviation of...

Yes I think ``` > cellrouter@pca$cell.embeddings[,1:5] PC1 PC2 PC3 PC4 PC5 s1.1 2.84716006 12.0613450 -0.12453762 -5.80070894 -15.24746632 s1.2 -12.52056164 4.1915314 6.21418451 -13.29060438 -4.60329067 s1.3 4.87975344 8.7908584 1.74915206 -7.65141561 0.82223327 s1.4...

Thank you ``` > dim(cellrouter@rawdata) [1] 12293 209 > dim(cellrouter@ndata) [1] 12293 209 > dim(cellrouter@sampTab) [1] 209 8 > cellrouter@ndata[1:5,1:5] s1.1 s1.2 s1.3 s1.4 s1.5 DDB_G0267178 0.00000000 0.009263254 0 0.01286397...

Thanks ``` > dim(cellrouter@rawdata) [1] 12293 209 > dim(cellrouter@ndata) [1] 12293 209 > dim(cellrouter@sampTab) [1] 209 8 > cellrouter@ndata[1:5,1:5] s1.1 s1.2 s1.3 s1.4 s1.5 DDB_G0267178 0.00000000 0.009263254 0 0.01286397 0...

It worked thanks a lot for your time I am eagerly going through the rest of tutorial