Andrey Fedorov

Results 207 issues of Andrey Fedorov

CircleCI 1.0 is being phased out in the end of August 2018. Migration guide: https://circleci.com/docs/2.0/migrating-from-1-2

enhancement
testing

Pointers to the data etc in #69 Use cases documentation section: https://qiicr.gitbooks.io/dcmqi-guide/use-cases.html

documentation

At the moment, standard codes used require manual typing of the code tuple, such as [here](https://github.com/QIICR/dcmqi/blob/master/libsrc/ParaMapConverter.cpp#L153). This is error-prone and long. Instead, we should use the `#define`d constants, as done...

enhancement
help wanted
good first issue

Following up on #240, it will help integration with Mayo Grunt, and it might help make the usage easier, if the individual sections corresponding to the segments in JSON could...

enhancement

From @jriesmeier: > DCMTK 3.6.3 is out now! https://blog.jriesmeier.com/2018/02/dcmtk-363/ > > And, after that I could finally push my changes regarding TID 4019 to the > repository: http://git.dcmtk.org/?p=dcmtk.git;a=commit;h=d9c3b87 This will...

enhancement
SR

As communicated by @potis (thanks!): >The most recent version of the dcmqi-grunt docker is available. > >The github repo is availble at > >https://github.com/Mayo-QIN/dcmqi > >And the docker image can...

enhancement

Leverage https://arxiv.org/abs/1612.07003 and CP-1705 (ftp://medical.nema.org/medical/dicom/cp/cp1705_vp_moretexturemeasures.pdf). This will be needed for https://github.com/Radiomics/pyradiomics/issues/269.

SR

In the instances where input DICOM files have issues, it may be difficult to debug it since the converter does not provide specifics on which file caused the trouble. The...

enhancement

Currently, conversion of segmentations for input datasets such as X-ray (CR) will fail due to various attributes that converters expects to be present. For the planar images, instead of expecting...

enhancement

We can at least report the percentage of segments that completed the conversion. Test dataset: http://slicer.kitware.com/midas3/item/324959 (from https://qiicr.gitbooks.io/dicom4qi/content/results/seg/freesurfer.html)

enhancement
SEG