Fergus Cooper

Hi @lolsenkettle, apologies for the delay on this. If you have followed these steps of the installation instructions: ``` sudo apt update sudo apt install chaste-dependencies ``` then you should...

Initial investigation seems to indicate a significant regression between these two runs: https://chaste.cs.ox.ac.uk/buildbot/builders/Continuous%20GCC/builds/609 and https://chaste.cs.ox.ac.uk/buildbot/builders/Continuous%20GCC/builds/610 It looks as though this may be related to the following ticket: https://github.com/Chaste/trac_archive/blob/master/issues/3070.md which may...

As far as the test suite is concerned, the only test that's taking an absurd amount of time is: TestCaSingleCellRandomMovement specifically, it's this for loop (where `num_runs == 2000`): ```cpp...

Having done some profiling of that test, this is the top bunch of rows from the `perf` output, and it's almost all(!) codegen: ``` # Overhead Command Shared Object Symbol...

I've illustrated my proposed solution to #122 in draft PR #123, and after that the same profiling looks like: ``` # Overhead Command Shared Object Symbol # ........ ............... ...................................................

Brief update, with a more thorough update coming later: The current state of the PR #111 is that the code compiles, but simulations do not yet "work". The `TestSemBasedSimulation` compiles...

### Update on finding the right place in the Chaste class hierarchy to put the SEM code I've spent some time identifying where to put the SEM code, and discussed...

@mirams you already did this for the public one! https://github.com/Chaste/.github

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Following our discussion this morning, I have opened #231 which outlines a strategy for temporarily ignoring (in a very selective and targeted way) some -Wmaybe-uninitialized c_vector warnings. The discussion indicated...