Cant install on mac

[TeslaC-137]

• PymRMR version: Current
• Python version: 2.7 and 3.7
• Operating System: MacOS Mojave 10.14.1

Description:

I can't install pymrmr package using pip on my mac.

What I Did

Sudarshans-MacBook-Pro:~ Sudarshan$ pip install pymrmr Collecting pymrmr Using cached https://files.pythonhosted.org/packages/b3/ab/903712947a2f5cd1af249132885dbd81ae8bf8cfd30fb3b3f2beddab23e8/pymrmr-0.1.8.tar.gz Requirement already satisfied: numpy>=1.12.0 in ./miniconda2/lib/python2.7/site-packages (from pymrmr) (1.15.4) Building wheels for collected packages: pymrmr Running setup.py bdist_wheel for pymrmr ... error Complete output from command /Users/Sudarshan/miniconda2/bin/python -u -c "import setuptools, tokenize;file='/private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-install-7yhZcv/pymrmr/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" bdist_wheel -d /private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-wheel-PplXhw --python-tag cp27: running bdist_wheel running build running build_py package init file 'pymrmr/init.py' not found (or not a regular file) running egg_info writing requirements to pymrmr.egg-info/requires.txt writing pymrmr.egg-info/PKG-INFO writing top-level names to pymrmr.egg-info/top_level.txt writing dependency_links to pymrmr.egg-info/dependency_links.txt reading manifest file 'pymrmr.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'pycache' found under directory '' warning: no previously-included files matching '.py[co]' found under directory '' warning: no files found matching '.jpg' under directory 'docs' warning: no files found matching '.png' under directory 'docs' warning: no files found matching '.gif' under directory 'docs' writing manifest file 'pymrmr.egg-info/SOURCES.txt' creating build creating build/lib.macosx-10.6-x86_64-2.7 creating build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/crank.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/mrmr.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/nrutil.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/nrutil.h -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pbetai.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pymrmr.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pymrmr.pyx -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/sort2.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr running build_ext skipping 'pymrmr/pymrmr.cpp' Cython extension (up-to-date) building 'pymrmr' extension creating build/temp.macosx-10.6-x86_64-2.7 creating build/temp.macosx-10.6-x86_64-2.7/pymrmr clang-omp -fno-strict-aliasing -I/Users/Sudarshan/miniconda2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/Sudarshan/miniconda2/lib/python2.7/site-packages/numpy/core/include -I/Users/Sudarshan/miniconda2/include/python2.7 -c pymrmr/pymrmr.cpp -o build/temp.macosx-10.6-x86_64-2.7/pymrmr/pymrmr.o -fopenmp -Ofast unable to execute 'clang-omp': No such file or directory error: command 'clang-omp' failed with exit status 1

---

Failed building wheel for pymrmr Running setup.py clean for pymrmr Failed to build pymrmr Installing collected packages: pymrmr Running setup.py install for pymrmr ... error Complete output from command /Users/Sudarshan/miniconda2/bin/python -u -c "import setuptools, tokenize;file='/private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-install-7yhZcv/pymrmr/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-record-kralVI/install-record.txt --single-version-externally-managed --compile: running install running build running build_py package init file 'pymrmr/init.py' not found (or not a regular file) running egg_info writing requirements to pymrmr.egg-info/requires.txt writing pymrmr.egg-info/PKG-INFO writing top-level names to pymrmr.egg-info/top_level.txt writing dependency_links to pymrmr.egg-info/dependency_links.txt reading manifest file 'pymrmr.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'pycache' found under directory '' warning: no previously-included files matching '.py[co]' found under directory '' warning: no files found matching '.jpg' under directory 'docs' warning: no files found matching '.png' under directory 'docs' warning: no files found matching '.gif' under directory 'docs' writing manifest file 'pymrmr.egg-info/SOURCES.txt' creating build creating build/lib.macosx-10.6-x86_64-2.7 creating build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/crank.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/mrmr.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/nrutil.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/nrutil.h -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pbetai.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pymrmr.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/pymrmr.pyx -> build/lib.macosx-10.6-x86_64-2.7/pymrmr copying pymrmr/sort2.cpp -> build/lib.macosx-10.6-x86_64-2.7/pymrmr running build_ext skipping 'pymrmr/pymrmr.cpp' Cython extension (up-to-date) building 'pymrmr' extension creating build/temp.macosx-10.6-x86_64-2.7 creating build/temp.macosx-10.6-x86_64-2.7/pymrmr clang-omp -fno-strict-aliasing -I/Users/Sudarshan/miniconda2/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/Sudarshan/miniconda2/lib/python2.7/site-packages/numpy/core/include -I/Users/Sudarshan/miniconda2/include/python2.7 -c pymrmr/pymrmr.cpp -o build/temp.macosx-10.6-x86_64-2.7/pymrmr/pymrmr.o -fopenmp -Ofast unable to execute 'clang-omp': No such file or directory error: command 'clang-omp' failed with exit status 1

----------------------------------------

Command "/Users/Sudarshan/miniconda2/bin/python -u -c "import setuptools, tokenize;file='/private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-install-7yhZcv/pymrmr/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-record-kralVI/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /private/var/folders/74/q8y9smnn2td223yqvypdc1p00000gn/T/pip-install-7yhZcv/pymrmr/ Sudarshans-MacBook-Pro:~ Sudarshan$

[fbrundu]

Hi, I'm sorry but I cannot work on this issue at the moment. Could you test if this solution works in your case?

Thanks, Francesco