pavian icon indicating copy to clipboard operation
pavian copied to clipboard

Install error

Open MaestSi opened this issue 5 years ago • 0 comments

Dear Pavian developers, I am facing some issues while trying to install the tool. Inside R v3.5.1 I am running: remotes::install_github("fbreitwieser/pavian", force=TRUE) These are the error messages I get:

Downloading GitHub repo fbreitwieser/pavian@master Running R CMD build...

  • checking for file ‘/tmp/RtmpwvnLb2/remotes62d91555a36a/fbreitwieser-pavian-eb5bfb3/DESCRIPTION’ ... OK
  • preparing ‘pavian’:
  • checking DESCRIPTION meta-information ... OK
  • checking for LF line-endings in source and make files and shell scripts
  • checking for empty or unneeded directories
  • building ‘pavian_0.8.4.tar.gz’
  • installing source package ‘pavian’ ... ** R ** inst ** byte-compile and prepare package for lazy loading Error in rbind(info, getNamespaceInfo(env, "S3methods")) : il numero di colonne delle matrici deve coincidere (si veda arg 2) ERROR: lazy loading failed for package ‘pavian’
  • removing ‘/home/simone/miniconda3/envs/Centrifuge_env/lib/R/library/pavian’
  • restoring previous ‘/home/simone/miniconda3/envs/Centrifuge_env/lib/R/library/pavian’ Errore: Failed to install 'pavian' from GitHub: (contertito da avviso) installation of package ‘/tmp/RtmpwvnLb2/file62d96101112f/pavian_0.8.4.tar.gz’ had non-zero exit status

Do you know how could I fix this? I installed R and all other dependencies with miniconda. Is there a Pavian conda installation? Thanks, Simone

MaestSi avatar Jul 02 '19 15:07 MaestSi